polymerases

General Information (Source: NCBI Gene,UniProt)

Text mining Term polymerases
UniProt ID E9NV89_9ROSI
Name PEP
Plastid-encoded RNA polymerase subunit beta
DNA-directed RNA polymerase subunit beta
Gene Names rpoB
Taxonomy Erodium carvifolium

General annotation

Function DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity).
Subcellular location Plastid, chloroplast (By similarity).

Gene Ontology

GO:0003677 DNA binding MF
GO:0003899 DNA-directed RNA polymerase activity MF
GO:0032549 ribonucleoside binding MF
GO:0009507 chloroplast CC

Sequence

>gi|323148822|ref|YP_004221915.1| RNA polymerase beta subunit [Erodium carvifolium]
MLDDRNEGMAVIPGLNQIQFEGFCRFVDQGLREELYKFPTVEGFIEDFLDIEDFLDIEDFPDIEDFLNEV
EEDLEKDIDVDEDVDEDIDEDVDVYFRLFAETSKLVEPLIKERDAVYESLTYSSELYVSAGLIWKRKGYS
MQKQRILIGNIPLMNSLGIFIVNGMYRMIVNQILQSPGIYYRSELDHKGILVYTGTIISDWGGRLELEID
RKARIWARVSRKQKISILVLSSAMGSNLREILENVCYPEIFLAFLDDKEKEKIGSKENAILEFYQQFVCV
GGDPVFSDSLCKELQNKFFRQRCELGRIGRRNINRRLNLDISQNNTFLLPRDILAATDHLIGIKFGMGTL
DDMNHLKNKRIRSVADLLQDQFGLALIRLEKVVKRAIRGAIKGKLIPTPQNFVTSTPLKTTYESFFGLHP
LSQVLDETNPLTQIVHGRKWSFLGPGGLTGRTASFRIRDIHPSYYGRICTIDTSEGINVGLIGSLAIHAR
IGDFGSLESPFYEISAKSKRARILYLSSRRDEYCMIGTGNSLALNESFQEEQIVTARYRQEFLTIAWEQV
HLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVALSRSEKCIVGTGLEGQVALDSGVPLITEH
AGKIISIHTDKILLSGNGDTLSIPLVMYQRSNKNTCIHQKPQVRRGKCIKKGQILADGAATVGGELALGK
NLLVAYMPWEGYNFEDAVLISERLVYEDILTSFHIRKYEIEIHVTSQGPEKITKKIPYLRTHLLRNLDKS
GIVILGSWVEEGDILVGKLRPQLAQDLAPEDRFVDAVFGTQIATSRATCLKLPRGGRGRVIDVRWIRSNP
ERESPERERIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGKPLDMVFNPLGVPSRMNVG
QIFECSLGLAGVLLDRHYRVAPFDERYEQEASRKLVFSELHEASKQTGNPWVFEPEYPGKSRIFDGRTGD
PFEQPVLVGQPYILKLIHQVDDKIHGRSSGPYASVTQQPLRGRAKRGGQRVGEMEVWALEGFGVAHILQE
MLTYKSDHLRTRDKIFGTTIIGGEMPKAEDAPESFRLLVRELRSLALELNHFLVSEKNFQMNRKEA

Options for BLAST

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Database Cross Reference

Ensembl Gene
UniGene
PDB
RefSeq YP_004221915.1
Pfam PF04565
PF04560
PF00562
PF04563
PF04561